STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104603084Protein Dr1 homolog. (155 aa)    
Predicted Functional Partners:
LOC104588747
DNA polymerase epsilon subunit 3.
   
 
0.833
LOC104588273
Dr1-associated corepressor-like.
   
 
 0.831
LOC104588779
Dr1-associated corepressor-like.
   
 
 0.831
LOC104595830
TATA-binding protein-associated factor BTAF1 isoform X1.
    
 
 0.801
LOC104597694
TATA-box-binding protein-like isoform X1.
    
 
 0.795
LOC104611161
TATA-box-binding protein.
    
 
 0.795
LOC104591516
Uncharacterized protein LOC104591516.
    
 0.705
LOC104598135
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1.
    
 0.705
LOC104594227
Transcriptional adapter.
    
 0.693
LOC104606608
Transcriptional adapter.
    
 0.693
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.