STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104603531Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (393 aa)    
Predicted Functional Partners:
LOC104589955
Structural maintenance of chromosomes protein 5 isoform X1.
   
 0.998
LOC104590136
Non-structural maintenance of chromosomes element 1 homolog isoform X1.
   
 0.998
LOC104599486
E3 SUMO-protein ligase MMS21.
    
 0.997
LOC104598515
Structural maintenance of chromosomes protein 6B-like isoform X1.
   
 0.997
LOC104595307
Structural maintenance of chromosomes protein.
   
 0.950
LOC104597635
Glucan endo-1,3-beta-glucosidase 4-like; Belongs to the glycosyl hydrolase 17 family.
   
 0.920
LOC104604020
Uncharacterized protein LOC104604020.
   
 0.920
LOC104604884
Glucan endo-1,3-beta-glucosidase 3-like; Belongs to the glycosyl hydrolase 17 family.
   
 0.920
LOC104606005
Melanoma-associated antigen 8 isoform X1.
   
 0.920
LOC104607366
Glucan endo-1,3-beta-glucosidase 2; Belongs to the glycosyl hydrolase 17 family.
   
 0.920
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.