STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104602371Malate dehydrogenase. (364 aa)    
Predicted Functional Partners:
LOC104609004
Citrate synthase.
  
 0.985
LOC104603546
Citrate synthase; Belongs to the citrate synthase family.
  
 0.983
LOC104589001
Fumarate hydratase 1, mitochondrial-like.
  
 0.970
LOC104598878
Fumarate hydratase 1, mitochondrial.
  
 0.970
LOC104591654
Malate synthase; Belongs to the malate synthase family.
   
 0.969
LOC104592062
Malic enzyme.
  
 0.950
LOC104604498
Malic enzyme.
  
 0.950
LOC104595577
Phosphoenolpyruvate carboxykinase [ATP]-like.
    
 0.919
LOC104610545
Phosphoenolpyruvate carboxykinase [ATP].
    
 0.919
LOC104590580
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.917
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.