STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104603577Polygalacturonase inhibitor-like. (314 aa)    
Predicted Functional Partners:
LOC104591152
Probable LRR receptor-like serine/threonine-protein kinase IRK.
  
     0.477
LOC104612001
Plant intracellular Ras-group-related LRR protein 1-like.
  
     0.448
LOC104591281
Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2.
  
     0.439
LOC104597983
Plant intracellular Ras-group-related LRR protein 7 isoform X1.
  
     0.438
LOC109115184
Leucine-rich repeat receptor protein kinase EMS1-like.
  
     0.415
LOC104613036
Putative disease resistance protein RGA1.
  
     0.411
LOC104586898
Leucine-rich repeat receptor-like protein kinase PXC1.
  
     0.407
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.