STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104602844Glycine-rich cell wall structural protein-like isoform X2. (373 aa)    
Predicted Functional Partners:
LOC104596205
Peroxisomal membrane protein PEX16.
     
 0.544
LOC104601441
Peroxisome biogenesis protein 5.
     
 0.522
LOC104598523
Peroxisome biogenesis protein 19-2-like isoform X1.
    
 0.516
LOC104602348
Peroxisome biogenesis protein 19-2-like.
    
 0.516
LOC104600595
Peroxisome biogenesis factor 10.
     
 0.502
LOC104602793
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.473
LOC104587760
Peroxisome biogenesis protein 3-2-like.
   
 
 0.470
LOC104596334
Peroxisome biogenesis protein 3-2-like.
   
 
 0.470
LOC104607638
ubiquitin-60S ribosomal protein L40.
   
 
  0.454
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.