STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1046007531-aminocyclopropane-1-carboxylate oxidase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (302 aa)    
Predicted Functional Partners:
LOC104591223
1-aminocyclopropane-1-carboxylate synthase 3-like.
     
 0.789
LOC104609198
1-aminocyclopropane-1-carboxylate synthase 3-like.
     
 0.789
LOC104600772
1-aminocyclopropane-1-carboxylate synthase 7-like.
     
 0.747
LOC104604621
1-aminocyclopropane-1-carboxylate synthase 7.
     
 0.747
LOC104600214
1-aminocyclopropane-1-carboxylate synthase-like.
     
 0.735
LOC104613052
1-aminocyclopropane-1-carboxylate synthase-like.
     
 0.735
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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