STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104603874Protein CutA, chloroplastic isoform X1. (193 aa)    
Predicted Functional Partners:
LOC104602584
N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic-like isoform X1.
     
 0.569
LOC104608369
Copper chaperone for superoxide dismutase, chloroplastic.
      
 0.503
LOC104611840
WASH complex subunit SWIP-like isoform X1.
      
 0.487
LOC104601586
Cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial.
     
 0.462
LOC104603544
Cyclic pyranopterin monophosphate synthase, mitochondrial isoform X1.
     
 0.462
LOC104613402
Thioredoxin reductase.
   
 
 0.459
LOC104587894
Indole-3-glycerol phosphate synthase, chloroplastic-like.
     
 0.433
LOC104608382
Indole-3-glycerol phosphate synthase, chloroplastic-like isoform X1.
     
 0.433
LOC104589003
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
      
 0.420
LOC104594130
Probable lipid-A-disaccharide synthase, mitochondrial.
      
 0.420
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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