STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104601832Gamma carbonic anhydrase 1, mitochondrial. (271 aa)    
Predicted Functional Partners:
LOC104591996
Uncharacterized protein LOC104591996.
   
 
 0.819
LOC104607307
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial; Belongs to the complex I 75 kDa subunit family.
   
 
 0.807
LOC104602741
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial.
  
   0.778
LOC104600392
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.
    
 
 0.770
LOC104593899
Uncharacterized protein LOC104593899.
    
   0.762
LOC104607659
Uncharacterized protein At2g27730, mitochondrial-like.
    
   0.762
LOC104599792
Uncharacterized protein LOC104599792.
    
   0.758
LOC104613061
Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial.
   
 
 0.757
LOC104595689
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
    
   0.755
LOC104604412
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Belongs to the complex I 20 kDa subunit family.
    
   0.755
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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