STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104602389Uncharacterized protein LOC104602389 isoform X1. (316 aa)    
Predicted Functional Partners:
LOC104607148
dnaJ homolog subfamily B member 6 isoform X1.
    
 
 0.503
LOC104607241
Uncharacterized protein LOC104607241 isoform X1.
      
 0.495
LOC104607638
ubiquitin-60S ribosomal protein L40.
   
 0.439
LOC104609108
Uncharacterized protein LOC104609108.
      
 0.416
LOC104592113
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
   
 0.408
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.