STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104602656MLO-like protein; May be involved in modulation of pathogen defense and leaf cell death. (578 aa)    
Predicted Functional Partners:
LOC104611993
Serine--glyoxylate aminotransferase.
    
 0.543
LOC104588586
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 isoform X1.
    
 0.453
LOC104611048
ATP phosphoribosyltransferase 1, chloroplastic-like.
    
 0.440
LOC104602920
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
   
 0.421
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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