STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1046031804-coumarate--CoA ligase 2-like. (548 aa)    
Predicted Functional Partners:
LOC104603320
cinnamoyl-CoA reductase 1-like.
  
 0.951
LOC104610717
cinnamoyl-CoA reductase 1-like.
  
 0.951
LOC104612098
Feruloyl CoA ortho-hydroxylase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
     
 0.909
LOC104591893
Chalcone synthase; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.883
LOC104602224
Chalcone synthase G-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.883
LOC104602223
Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.883
LOC104602226
Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.883
CHSC
Chalcone synthase 1; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.883
LOC104600622
Phenylalanine ammonia-lyase.
  
 
 0.874
LOC104595050
Phenylalanine ammonia-lyase.
  
 
 0.860
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.