STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104603188FGGY carbohydrate kinase domain-containing protein-like isoform X1. (576 aa)    
Predicted Functional Partners:
LOC104586329
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.829
LOC104604515
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.829
LOC104601652
26S proteasome regulatory subunit RPN13.
   
 0.829
LOC104607011
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.821
LOC104588637
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.818
LOC104591614
26S proteasome non-ATPase regulatory subunit 6 homolog.
   
 0.816
LOC104592980
26S proteasome non-ATPase regulatory subunit 6 homolog.
   
 0.816
LOC104604283
Probable 26S proteasome non-ATPase regulatory subunit 3.
   
 0.789
LOC104603655
Probable 26S proteasome non-ATPase regulatory subunit 3.
   
 0.789
LOC104586580
26S proteasome non-ATPase regulatory subunit 11 homolog.
   
 0.788
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.