STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10460332840S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (143 aa)    
Predicted Functional Partners:
LOC104600524
40S ribosomal protein S29.
  
 0.992
LOC104598979
40S ribosomal protein S21-2-like isoform X1.
   
 0.990
LOC104609534
40S ribosomal protein S15 isoform X1; Belongs to the universal ribosomal protein uS19 family.
  
 0.978
LOC104612419
40S ribosomal protein S15-like; Belongs to the universal ribosomal protein uS19 family.
  
 0.978
LOC104607638
ubiquitin-60S ribosomal protein L40.
   
 0.977
LOC104586005
40S ribosomal protein S28.
  
 0.976
LOC104593649
40S ribosomal protein S28-like.
  
 0.976
LOC104588658
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.975
LOC104593186
40S ribosomal protein S23-like; Belongs to the universal ribosomal protein uS12 family.
  
 0.975
LOC104586585
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.974
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.