STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104603857Uncharacterized protein At1g76660. (503 aa)    
Predicted Functional Partners:
LOC104598806
Uncharacterized protein LOC104598806.
      
 0.563
LOC104611321
Uncharacterized protein LOC104611321.
      
 0.560
LOC104607932
Uncharacterized protein LOC104607932.
      
 0.539
LOC104603845
Uncharacterized protein LOC104603845.
      
 0.491
LOC104587745
Uncharacterized protein LOC104587745.
      
 0.485
LOC104594573
Uncharacterized protein LOC104594573 isoform X1.
      
 0.485
LOC104611586
Uncharacterized protein LOC104611586.
      
 0.483
LOC104613126
Uncharacterized protein LOC104613126.
      
 0.483
LOC104610092
Uncharacterized protein LOC104610092.
      
 0.479
LOC104606052
Uncharacterized protein LOC104606052.
      
 0.473
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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