STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104608370alpha-L-fucosidase 1-like. (498 aa)    
Predicted Functional Partners:
LOC104607444
alpha-L-fucosidase 2.
 
 
 0.962
LOC104586313
alpha-L-fucosidase 1-like.
  
  
 
0.903
LOC104593626
Uncharacterized protein LOC104593626.
 
      0.669
LOC104596494
Mannosylglycoprotein endo-beta-mannosidase.
 
   
 0.593
LOC104604811
Outer envelope protein 64, mitochondrial.
      
 0.555
LOC104611315
Uncharacterized protein LOC104611315; Belongs to the glycosyl hydrolase 2 family.
    
 0.531
LOC104604718
Bifunctional fucokinase/fucose pyrophosphorylase isoform X1.
      
 0.503
LOC104591526
Alpha-galactosidase.
   
  
 0.490
LOC104593056
Alpha-galactosidase.
   
  
 0.490
LOC104586488
Serine/threonine-protein kinase-like protein CCR4.
      
 0.471
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.