STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104608647VQ motif-containing protein 9. (330 aa)    
Predicted Functional Partners:
LOC104589026
Sigma factor binding protein 1, chloroplastic-like.
      
 0.569
LOC104611361
Sigma factor binding protein 1, chloroplastic-like.
      
 0.569
LOC104599702
VQ motif-containing protein 22.
      
 0.566
LOC104608204
VQ motif-containing protein 4.
      
 0.564
LOC104603542
VQ motif-containing protein 25-like.
      
 0.560
LOC104613516
VQ motif-containing protein 10-like.
      
 0.560
LOC104594031
VQ motif-containing protein 31-like.
      
 0.502
LOC104592525
VQ motif-containing protein 11-like.
      
 0.497
LOC104593616
Calmodulin-binding protein 25-like.
      
 0.495
LOC104609729
Cell division cycle and apoptosis regulator protein 1.
      
 0.489
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (28%) [HD]