STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104605098Universal stress protein PHOS32-like. (161 aa)    
Predicted Functional Partners:
LOC104606906
Tetratricopeptide repeat protein SKI3.
    
 0.751
LOC104596571
Protein CDC73 homolog.
    
 0.649
LOC104597963
Protein LEO1 homolog isoform X1.
    
 0.621
LOC104600580
Protein CTR9 homolog.
    
 0.603
LOC104589188
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.587
LOC104597017
DExH-box ATP-dependent RNA helicase DExH11.
    
 0.561
LOC104607996
DExH-box ATP-dependent RNA helicase DExH15 chloroplastic.
    
 0.561
LOC104611010
Elongation factor 1-alpha isoform X1.
    
 0.512
LOC104597147
Protein PAF1 homolog.
   
 0.494
LOC104601298
Uncharacterized protein LOC104601298.
   
 0.494
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.