STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104608730Remorin-like. (194 aa)    
Predicted Functional Partners:
LOC104601402
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
    
 0.945
LOC104601523
Uncharacterized protein LOC104601523 isoform X1.
    
 0.907
LOC104594124
Centromere/kinetochore protein zw10 homolog isoform X1.
    
 0.892
LOC104591119
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.873
LOC104593494
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.873
LOC104592278
Syntaxin-32-like; Belongs to the syntaxin family.
   
 0.868
LOC104595252
Syntaxin-32-like; Belongs to the syntaxin family.
   
 0.868
LOC104596962
Syntaxin-31; Belongs to the syntaxin family.
   
 0.868
LOC104587112
SEC1 family transport protein SLY1-like; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.863
LOC104603740
SEC1 family transport protein SLY1-like; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.863
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.