STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104605976Asparagine synthetase [glutamine-hydrolyzing] 3-like. (136 aa)    
Predicted Functional Partners:
LOC104601951
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
 
 0.865
LOC104595144
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 
 0.726
LOC104602751
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 
 0.724
LOC104588574
Histidinol-phosphate aminotransferase, chloroplastic isoform X1.
  
 
 0.714
LOC104611993
Serine--glyoxylate aminotransferase.
    
 0.681
LOC104600364
Glutamate synthase 1 [NADH], chloroplastic.
    
 0.573
LOC104604004
Glutamate synthase 1 [NADH], chloroplastic isoform X1.
    
 0.573
LOC104605559
Glutamate synthase 1 [NADH], chloroplastic-like.
    
 0.573
LOC104611350
Ferredoxin-dependent glutamate synthase, chloroplastic.
    
 0.565
LOC104592765
Aspartokinase 2, chloroplastic-like isoform X1.
  
  
 0.561
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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