STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104610467Argininosuccinate synthase, chloroplastic. (492 aa)    
Predicted Functional Partners:
LOC104594597
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
  
  
 0.999
LOC104595651
Ornithine carbamoyltransferase, chloroplastic-like; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.999
LOC104595496
Argininosuccinate lyase, chloroplastic.
 
 0.999
LOC104608189
Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic.
  
  
 0.999
LOC104588044
Aspartate carbamoyltransferase 1, chloroplastic-like; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.991
LOC104594081
Aspartate carbamoyltransferase 1, chloroplastic-like; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.991
LOC104611000
Carbamoyl-phosphate synthase small chain, chloroplastic.
  
 
 0.987
LOC104588652
Carbamoyl-phosphate synthase large chain, chloroplastic-like.
 
 
 0.986
LOC104594765
Carbamoyl-phosphate synthase large chain, chloroplastic-like.
 
 
 0.986
LOC104600938
Carbamoyl-phosphate synthase large chain, chloroplastic-like.
 
 
 0.986
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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