STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104610039Electron transfer flavoprotein subunit beta, mitochondrial-like. (251 aa)    
Predicted Functional Partners:
LOC104598996
Electron transfer flavoprotein subunit alpha, mitochondrial.
 0.999
LOC104598262
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.978
LOC104613444
Uncharacterized protein LOC104613444.
  
 0.958
LOC104602940
Geranylgeranyl diphosphate reductase, chloroplastic.
  
 
 0.925
LOC104594804
isovaleryl-CoA dehydrogenase, mitochondrial.
  
 0.894
LOC104609245
Uncharacterized protein LOC104609245.
  
 0.894
LOC104594917
Acyl-coenzyme A oxidase 4, peroxisomal-like isoform X1.
  
 0.887
LOC104598456
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.887
LOC104602580
Acyl-coenzyme A oxidase 4, peroxisomal-like.
  
 0.887
LOC104605944
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.887
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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