STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104611303Tubulin-folding cofactor B. (242 aa)    
Predicted Functional Partners:
LOC104590400
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
    0.703
LOC104598593
Tubulin-folding cofactor D.
    
 0.688
LOC104601858
ADP-ribosylation factor-like protein 2 isoform X1; Belongs to the small GTPase superfamily. Arf family.
   
  
 0.629
LOC104606383
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
 
 0.605
LOC104589486
Tubulin-folding cofactor E isoform X1.
      
 0.578
LOC104612492
Tubulin-folding cofactor C.
      
 0.577
LOC104599586
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
      
 0.504
LOC104609746
Anaphase-promoting complex subunit 6.
      
 0.497
LOC104605574
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  
 0.416
LOC104605339
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  
 0.416
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.