STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104611691Uncharacterized protein LOC104611691. (264 aa)    
Predicted Functional Partners:
LOC104590638
Uncharacterized protein LOC104590638 isoform X1.
 
     0.923
LOC104598141
Activating signal cointegrator 1.
    
 
 0.919
LOC104593143
DExH-box ATP-dependent RNA helicase DExH17-like.
    
 0.915
LOC104597958
DExH-box ATP-dependent RNA helicase DExH14 isoform X1.
    
 0.915
LOC104595133
Uncharacterized protein LOC104595133 isoform X1.
    
 0.875
LOC104600226
dnaJ protein ERDJ2A.
    
 0.774
LOC104606881
DExH-box ATP-dependent RNA helicase DExH12-like.
    
 0.774
LOC104600316
Crooked neck-like protein 1 isoform X1.
   
  
 0.516
LOC104595979
Zinc finger protein 830.
      
 0.483
LOC104613367
Proline-rich protein PRCC.
      
 0.463
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.