STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104610898LRR receptor-like serine/threonine-protein kinase ERL1 isoform X1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (981 aa)    
Predicted Functional Partners:
LOC104600040
Protein EPIDERMAL PATTERNING FACTOR 2-like.
    
 0.963
LOC104596035
Mitogen-activated protein kinase kinase kinase YODA-like.
    
0.904
LOC104610620
Mitogen-activated protein kinase kinase kinase YODA-like.
    
 
0.903
LOC104592478
Protein TOO MANY MOUTHS.
  
 
0.674
LOC104596612
EPIDERMAL PATTERNING FACTOR-like protein 4.
    
 
 0.410
LOC104598723
Uncharacterized protein LOC104598723.
    
 
 0.410
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.