STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104609594ADP-ribosylation factor-like protein 5; Belongs to the small GTPase superfamily. Arf family. (183 aa)    
Predicted Functional Partners:
LOC104606903
Kinesin-like calmodulin-binding protein homolog isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.855
LOC104611359
E3 ubiquitin-protein ligase KEG isoform X1.
    
 0.681
LOC104599588
Phosphatidylinositol 4-kinase beta 2-like isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.656
LOC104606763
Phosphatidylinositol 4-kinase beta 1-like; Belongs to the PI3/PI4-kinase family.
    
 0.656
LOC104595720
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.640
LOC104601891
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.640
LOC104610316
LOW QUALITY PROTEIN: coatomer subunit gamma-2.
    
 0.640
LOC104589974
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.633
LOC104585650
ARF guanine-nucleotide exchange factor GNL2.
    
 0.631
LOC104605370
ARF guanine-nucleotide exchange factor GNOM-like.
    
 0.631
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.