STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104612639Adenylate isopentenyltransferase 5, chloroplastic. (329 aa)    
Predicted Functional Partners:
LOC104602968
Cytokinin hydroxylase-like.
     
 0.908
LOC104601870
Cytokinin hydroxylase-like.
     
 0.908
LOC104599644
Isopentenyl-diphosphate Delta-isomerase I.
    
 0.846
LOC104595783
4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic.
     
 0.827
LOC104588101
Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic-like.
  
 
 0.674
LOC104595767
Geranylgeranyl pyrophosphate synthase, chloroplastic-like; Belongs to the FPP/GGPP synthase family.
  
 
 0.674
LOC104602603
Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like; Belongs to the FPP/GGPP synthase family.
  
 
 0.674
LOC104603687
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 
 0.674
LOC104610233
Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1; Belongs to the FPP/GGPP synthase family.
  
 
 0.674
LOC104610946
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like; Belongs to the FPP/GGPP synthase family.
  
 
 0.674
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (28%) [HD]