STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109114375Uncharacterized protein LOC109114375. (157 aa)    
Predicted Functional Partners:
LOC104608783
Uncharacterized protein LOC104608783.
  
     0.513
LOC104612285
Uncharacterized protein LOC104612285.
  
     0.513
LOC104594416
Uncharacterized protein LOC104594416.
  
     0.512
LOC109115749
Uncharacterized protein LOC109115749.
 
     0.510
LOC104590619
Uncharacterized protein LOC104590619.
  
     0.507
LOC109114988
Uncharacterized protein LOC109114988.
 
     0.506
LOC104607033
Uncharacterized protein LOC104607033.
  
     0.504
LOC109114085
Uncharacterized protein LOC109114085.
  
     0.499
LOC109113913
Uncharacterized protein LOC109113913.
  
     0.498
LOC109115353
Uncharacterized protein LOC109115353.
  
     0.487
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.