STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104589985Uncharacterized protein LOC104589985. (382 aa)    
Predicted Functional Partners:
LOC104600493
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.698
LOC104607499
NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like.
  
 0.687
LOC104592204
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.674
LOC104595200
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.674
LOC104602361
Aldo-keto reductase family 4 member C9-like.
  
0.610
LOC104598507
Aldo-keto reductase family 4 member C9-like.
  
 0.610
LOC104595919
Non-functional NADPH-dependent codeinone reductase 2-like.
  
 0.524
LOC104602944
Non-functional NADPH-dependent codeinone reductase 2-like.
  
 0.524
LOC104607965
Non-functional NADPH-dependent codeinone reductase 2-like.
  
 0.524
LOC104607226
Methylecgonone reductase-like.
  
 0.524
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.