STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104596889WD repeat-containing protein 44-like. (923 aa)    
Predicted Functional Partners:
LOC104599422
Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X1.
  
     0.435
LOC104612897
Cell division cycle 20.2, cofactor of APC complex-like.
  
     0.416
LOC104596314
Cell division cycle 20.1, cofactor of APC complex-like isoform X1.
  
     0.412
LOC104612857
Cell division cycle 20.2, cofactor of APC complex-like.
  
     0.412
LOC104591554
Vegetative incompatibility protein HET-E-1.
  
     0.412
LOC104586899
Cell division cycle 20.1, cofactor of APC complex-like.
  
     0.404
LOC104607968
Vegetative incompatibility protein HET-E-1-like.
  
     0.401
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.