STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104594418BTB/POZ domain-containing protein At2g04740. (450 aa)    
Predicted Functional Partners:
LOC109114489
BTB/POZ domain-containing protein At2g04740-like.
 
      0.712
LOC104606332
Protein N-terminal glutamine amidohydrolase isoform X4.
    
 
 0.500
LOC104606903
Kinesin-like calmodulin-binding protein homolog isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.481
LOC104606744
Ribosome maturation protein SBDS.
      
 0.479
LOC104586390
Putative cullin-like protein 2; Belongs to the cullin family.
   
 0.478
LOC104597343
cullin-3A-like isoform X1; Belongs to the cullin family.
   
 0.478
LOC104597358
cullin-3A-like; Belongs to the cullin family.
   
 0.478
LOC104599020
Cullin-1; Belongs to the cullin family.
   
 0.478
LOC104606098
Cullin-1-like; Belongs to the cullin family.
   
 0.478
LOC104588409
Serine/threonine-protein phosphatase.
    
 0.477
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.