STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109115727Uncharacterized protein LOC109115727. (200 aa)    
Predicted Functional Partners:
LOC109114099
Uncharacterized protein LOC109114099.
 
     0.528
LOC109114314
Uncharacterized protein LOC109114314.
  
     0.528
LOC109114647
Uncharacterized protein LOC109114647.
  
     0.514
LOC109115086
Uncharacterized protein LOC109115086.
  
     0.512
LOC104607029
Uncharacterized protein LOC104607029.
  
     0.510
LOC109115568
Uncharacterized protein LOC109115568.
  
     0.509
LOC109115574
Uncharacterized protein LOC109115574.
  
     0.507
LOC104590130
Uncharacterized protein LOC104590130.
  
     0.490
LOC104600803
Uncharacterized protein LOC104600803.
  
     0.488
LOC104587955
Uncharacterized protein LOC104587955.
  
     0.480
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.