STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104611810psbQ-like protein 3, chloroplastic. (205 aa)    
Predicted Functional Partners:
LOC104598092
Photosynthetic NDH subunit of lumenal location 2, chloroplastic.
   
 
 0.674
LOC104590164
Photosynthetic NDH subunit of lumenal location 3, chloroplastic.
   
 
0.673
LOC104587312
Photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1.
   
 
 0.671
LOC104594634
psbP-like protein 1, chloroplastic.
   
 
 0.648
LOC104606483
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
     
 0.549
LOC104599010
psbP domain-containing protein 7, chloroplastic.
     
 0.542
LOC104588920
Photosystem II 10 kDa polypeptide, chloroplastic.
     
 0.536
LOC104600982
Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
     
 0.536
LOC104612550
Photosystem II repair protein PSB27-H1, chloroplastic.
   
 
 0.512
LOC104587643
Photosystem I reaction center subunit IV, chloroplastic.
     
 0.505
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.