STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0019Hypothetical protein. (409 aa)    
Predicted Functional Partners:
AS9A_0018
Transcriptional regulator, TetR family.
 
     0.881
AS9A_0021
Hypothetical protein.
 
     0.775
AS9A_1172
Transcriptional regulator, TetR family.
 
     0.766
AS9A_4423
Hypothetical protein.
 
     0.704
AS9A_4478
Putative transcriptional regulator.
  
     0.696
AS9A_0020
Hypothetical protein.
       0.623
AS9A_3051
Transcriptional regulator, TetR family.
  
     0.602
AS9A_2641
Hypothetical protein.
  
     0.572
AS9A_3209
Putative transcriptional regulator, TetR family.
  
     0.546
AS9A_2874
AAA ATPase.
  
    0.534
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.