STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknAPutative serine/threonine protein kinase PknA. (489 aa)    
Predicted Functional Partners:
AS9A_0035
Serine/threonine protein phosphatase PstP.
 
 0.994
pknB
Serine/threonine-protein kinase PknB.
 
 
0.985
rodA
Putative cell division protein RodA; Belongs to the SEDS family.
 
 
 0.982
AS9A_0033
Penicillin binding protein transpeptidase domain protein.
  
  
 0.977
AS9A_3139
Putative signal transduction protein GarA.
 
 
 
 0.977
AS9A_0036
FHA domain containing protein.
 
 
 
 0.975
AS9A_0037
FHA domain-containing protein.
 
 
 
 0.912
AS9A_1335
Cell division initiation protein.
  
 
 0.881
AS9A_2000
Serine/threonine phosphatase.
 
 
 0.862
AS9A_2672
Serine/threonine phosphatase.
 
 
 0.860
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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