STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltB1Glutamate synthase beta subunit. (482 aa)    
Predicted Functional Partners:
AS9A_0038
Glutamate synthase large subunit.
 0.999
AS9A_1460
Ferredoxin-dependent glutamate synthase 1.
 0.999
AS9A_2461
Glutamate synthase (NADPH); Belongs to the glutamate synthase family.
 
 0.968
AS9A_1256
Glutamine synthetase.
  
 
 0.938
AS9A_3611
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.935
nuoF
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
 0.921
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 
 0.919
putA
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.918
glnA
Glutamine synthetase I.
  
 
 0.916
rocA1
1-pyrroline-5-carboxylate dehydrogenase.
   
 0.915
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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