STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0055Putative 3-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)    
Predicted Functional Partners:
AS9A_3620
Fatty-acid synthase I.
  
 0.793
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
     
 0.658
AS9A_4425
Non-ribosomal peptide synthetase.
  
 
 0.584
AS9A_0056
Hypothetical protein.
       0.492
pknK2
Serine/threonine protein kinase.
   
 0.488
AS9A_0455
Exopolyphosphatase.
  
 
 0.482
AS9A_4071
Non-ribosomal peptide synthetase.
  
 
 0.482
AS9A_0108
Polyketide synthase.
  
 
 0.469
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.463
AS9A_0266
Global nitrogen regulator NtcA.
  
 0.446
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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