STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0065Putative two-component histidine kinase. (387 aa)    
Predicted Functional Partners:
AS9A_0066
Two-component system, NarL family, response regulator DesR; Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein.
 0.996
AS9A_3088
Transcriptional regulatory protein UhpA.
 0.986
tcsS2
Two component sensor histidine kinase.
  
  
 
0.926
AS9A_0198
Two-component system response regulator.
 
 
 0.815
AS9A_0062
ABC-2 type transporter.
 
  
 0.771
AS9A_2056
Putative NarL family two-component response regulator.
 
 0.743
AS9A_3082
Two-component sensor kinase.
  
     0.742
AS9A_3907
Two component transcriptional regulator, LuxR family.
 
 0.728
AS9A_3822
Two component system response regulator.
 
 0.725
AS9A_0128
Putative NarL family two-component response regulator.
 
 0.721
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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