STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0157Conserved domain protein. (330 aa)    
Predicted Functional Partners:
AS9A_0156
Luciferase family protein.
 
     0.595
AS9A_0158
Flavin-containing monooxygenase.
       0.524
AS9A_4559
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.499
AS9A_1543
TetR family transcriptional regulator.
  
     0.489
AS9A_0160
3-ketosteroid dehydrogenase.
     
 0.481
AS9A_2517
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
  
     0.480
AS9A_0621
Serine 3-dehydrogenase.
 
    0.475
AS9A_0083
Hypothetical protein.
  
     0.462
AS9A_3083
YqeB.
  
     0.453
AS9A_0165
Transcriptional regulator, IclR family.
 
   
 0.442
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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