STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0280Type II secretion system protein. (268 aa)    
Predicted Functional Partners:
AS9A_0279
Type II secretion system protein E.
 
  
 0.947
AS9A_0281
Type II secretion system F domain protein.
 
     0.892
AS9A_0278
SmmB protein.
 
     0.888
AS9A_0283
Hypothetical protein.
  
  
 0.825
AS9A_3562
Hypothetical protein.
 
  
 0.811
AS9A_0282
Hypothetical protein.
     
 0.747
AS9A_4570
Glycoprotein.
  
     0.735
AS9A_0192
Hypothetical protein.
  
     0.620
AS9A_4541
Putative membrane protein.
  
     0.590
AS9A_3211
Hypothetical protein.
  
     0.567
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.