STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mce4AMce family protein. (449 aa)    
Predicted Functional Partners:
yrbE4A
ABC-transporter integral membrane protein.
 
 
 0.969
yrbE4B
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.968
mce4C
Virulence factor Mce family protein.
 
  
 0.967
AS9A_0419
Putative ABC transporter ATP-binding protein.
 
 
 0.966
mce1B
Putative Mce family protein.
  
 0.960
mce4D
MCE family protein.
 
  
 0.954
AS9A_0426
Putative Mce family protein.
 
  
 0.915
AS9A_0417
Putative Mce family protein.
 
  
 0.906
mce1E
Virulence factor Mce family protein.
 
  
 0.885
AS9A_0415
Virulence factor Mce family protein.
 
  
 0.883
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.