STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0601Extracellular ligand-binding receptor. (435 aa)    
Predicted Functional Partners:
AS9A_0599
Urea ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
AS9A_0600
Urea ABC superfamily ATP binding cassette transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
AS9A_0597
ABC transporter-like protein.
 
 
 0.993
AS9A_0598
Putative ABC transporter ATP-binding protein.
 
  
 0.992
AS9A_3959
Branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.668
AS9A_1476
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.658
AS9A_3958
ABC superfamily ATP binding cassette transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.656
AS9A_1475
ABC branched chain amino acid transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.638
AS9A_3956
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein.
 
  
 0.577
AS9A_1473
High-affinity branched-chain amino acid transport ATP-binding protein livF.
 
  
 0.570
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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