STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0612Hypothetical protein. (333 aa)    
Predicted Functional Partners:
AS9A_0613
MerR family transcriptional regulator.
 
     0.823
AS9A_4337
Hypothetical protein.
  
     0.582
AS9A_3592
Putative TetR family transcriptional regulator.
 
     0.570
AS9A_0444
TetR-family transcriptional regulator.
 
     0.549
AS9A_0046
Hypothetical protein.
  
     0.546
AS9A_0382
Ferredoxin-NADP reductase.
 
    0.540
AS9A_2865
4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
    0.529
AS9A_0516
Putative ferredoxin--NADP(+) reductase.
 
    0.522
AS9A_1924
Hypothetical protein.
 
     0.515
AS9A_0611
Transmembrane protein.
       0.510
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.