STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0708Pyruvate carboxyltransferase. (307 aa)    
Predicted Functional Partners:
AS9A_0709
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
  0.939
pcaJ2
3-oxoacid Co-A transferase beta subunit.
 
 
 0.938
AS9A_2768
Putative succinyl-CoA--3-ketoacid CoA-transferase alpha subunit.
  
 
 0.933
AS9A_4348
Putative acyl-CoA synthetase.
 
 
 0.932
AS9A_0436
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.931
AS9A_1023
2-oxoacid:ferredoxin oxidoreductase, alpha subunit.
  
 
 0.927
AS9A_0798
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
AS9A_0935
Possible lipid carrier protein or keto acyl-CoA thiolase.
  
 
 0.922
AS9A_0948
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
AS9A_0964
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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