STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0718Hypothetical protein. (337 aa)    
Predicted Functional Partners:
AS9A_0716
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.579
AS9A_0717
Hypothetical protein.
       0.572
AS9A_2291
AraC family transcriptional regulator.
 
 
 0.544
AS9A_0721
Putative cholesterol oxidase.
     
 0.519
AS9A_0720
Putative monooxygenase.
       0.508
AS9A_0719
Hypothetical protein.
       0.497
AS9A_0722
Putative hydrolase.
       0.497
cobB-2
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
  
  
 0.414
cobB-3
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
  
  
 0.414
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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