Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AS9A_0804ABC-2 type transporter. (242 aa)    
Predicted Functional Partners:
AS9A_0803
Putative ABC transporter ATP-binding protein.
 
  
 0.951
AS9A_0462
ABC drug resistance transporter, transmembrane protein.
 
 
 0.932
AS9A_3066
Antibiotic resistance ABC superfamily ATP binding cassette transporter, ABC protein.
 
  
 0.850
AS9A_4345
Putative ABC transporter ATP-binding protein.
 
  
 0.850
AS9A_0463
Putative ABC transporter ATP-binding protein.
 
  
 0.849
AS9A_0814
Daunorubicin resistance ABC superfamily ATP binding cassette transporter, ATP-binding protein.
 
  
 0.849
AS9A_4246
ABC-type transport system, permease protein.
  
  
  0.833
AS9A_4245
Daunorubicin resistance ABC transporter ATPase subunit.
 
  
 0.753
AS9A_0802
TetR family transcriptional regulator.
 
     0.615
AS9A_0805
Hypothetical protein.
       0.554
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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