Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AS9A_0821 | AS9A_0822 | AS9A_0821 | AS9A_0822 | DNA repair helicase. | Propionate--CoA ligase. | 0.596 |
AS9A_0821 | AS9A_0823 | AS9A_0821 | AS9A_0823 | DNA repair helicase. | Hypothetical protein. | 0.947 |
AS9A_0821 | AS9A_2021 | AS9A_0821 | AS9A_2021 | DNA repair helicase. | 5'-3' exonuclease. | 0.620 |
AS9A_0821 | AS9A_2857 | AS9A_0821 | AS9A_2857 | DNA repair helicase. | Putative WD-40 repeat protein. | 0.609 |
AS9A_0821 | dinG | AS9A_0821 | AS9A_3634 | DNA repair helicase. | Putative ATP-dependent DNA helicase DinG. | 0.920 |
AS9A_0821 | polA | AS9A_0821 | AS9A_1477 | DNA repair helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.678 |
AS9A_0821 | rpoA | AS9A_0821 | AS9A_0498 | DNA repair helicase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.896 |
AS9A_0821 | rpoB | AS9A_0821 | AS9A_0430 | DNA repair helicase. | DNA-directed RNA polymerase subunit beta 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.908 |
AS9A_0821 | rpoC | AS9A_0821 | AS9A_0431 | DNA repair helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.629 |
AS9A_0821 | rpoZ | AS9A_0821 | AS9A_1862 | DNA repair helicase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.899 |
AS9A_0822 | AS9A_0821 | AS9A_0822 | AS9A_0821 | Propionate--CoA ligase. | DNA repair helicase. | 0.596 |
AS9A_0822 | AS9A_0823 | AS9A_0822 | AS9A_0823 | Propionate--CoA ligase. | Hypothetical protein. | 0.747 |
AS9A_0823 | AS9A_0821 | AS9A_0823 | AS9A_0821 | Hypothetical protein. | DNA repair helicase. | 0.947 |
AS9A_0823 | AS9A_0822 | AS9A_0823 | AS9A_0822 | Hypothetical protein. | Propionate--CoA ligase. | 0.747 |
AS9A_2021 | AS9A_0821 | AS9A_2021 | AS9A_0821 | 5'-3' exonuclease. | DNA repair helicase. | 0.620 |
AS9A_2021 | dinG | AS9A_2021 | AS9A_3634 | 5'-3' exonuclease. | Putative ATP-dependent DNA helicase DinG. | 0.710 |
AS9A_2021 | polA | AS9A_2021 | AS9A_1477 | 5'-3' exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.663 |
AS9A_2021 | rpoA | AS9A_2021 | AS9A_0498 | 5'-3' exonuclease. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.434 |
AS9A_2857 | AS9A_0821 | AS9A_2857 | AS9A_0821 | Putative WD-40 repeat protein. | DNA repair helicase. | 0.609 |
AS9A_2857 | dinG | AS9A_2857 | AS9A_3634 | Putative WD-40 repeat protein. | Putative ATP-dependent DNA helicase DinG. | 0.848 |
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