STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nirDPutative 2Fe-2S rieske nitrite reductase small subunit. (91 aa)    
Predicted Functional Partners:
AS9A_0976
Ferredoxin reductase.
 
 
 0.933
AS9A_0972
FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family.
  
    0.780
AS9A_0973
Hypothetical protein; Belongs to the methylenetetrahydrofolate reductase family.
     
 0.780
AS9A_0974
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.774
folD-2
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.773
AS9A_4288
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
 
 0.652
AS9A_2814
Putative ferredoxin reductase.
 
 
 0.647
AS9A_3939
Possible ferredoxin--NAD(+) reductase.
 
 
 0.628
nasD
Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.601
cysG
Siroheme synthase CysG.
  
  
 0.596
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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