STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_1095Binding-protein-dependent transport systems inner membrane component. (273 aa)    
Predicted Functional Partners:
AS9A_1094
ABC oligopeptide transporter, permease component.
 
 0.999
AS9A_1096
Putative peptide ABC transporter ATP-binding protein.
 
 0.999
AS9A_2632
Putative ABC transporter ATP-binding protein.
 
 0.999
AS9A_1093
Extracellular solute-binding protein, family 5.
 
 0.998
AS9A_2634
Dipeptide/oligopeptide ABC transporter, permease protein.
 
 0.997
AS9A_2635
Extracellular solute-binding protein, family 5.
 0.990
AS9A_1820
ABC superfamily ATP binding cassette transporter, binding protein.
 
 0.966
AS9A_2631
Nickel import ATP-binding protein NikE.
  
 0.950
AS9A_2633
Putative ABC transporter permease protein.
  
  
 
0.917
AS9A_2085
ABC amino acid transporter, ATPase component.
    
 0.849
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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