STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_1290Hypothetical protein. (444 aa)    
Predicted Functional Partners:
AS9A_1289
NlpC/P60 family protein.
  
  
 0.843
AS9A_1291
Glycosyl transferase, group 1.
  
    0.773
AS9A_1952
Hypothetical protein.
 
     0.609
AS9A_0417
Putative Mce family protein.
  
     0.582
AS9A_0390
Possible transcriptional regulator, TetR family protein.
  
     0.579
AS9A_0891
Hypothetical protein.
  
 
 
 0.567
AS9A_0647
Hypothetical protein.
  
     0.566
AS9A_1288
NlpC/P60 family protein.
  
  
 0.557
AS9A_0807
Putative mycolyltransferase.
 
  
 0.552
AS9A_1111
Phosphoribosylglycinamide synthetase.
  
 
   0.546
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.