STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_1802CsbD family protein; Belongs to the UPF0337 (CsbD) family. (65 aa)    
Predicted Functional Partners:
AS9A_0504
Hypothetical protein.
 
     0.642
AS9A_1408
Membrane protein-like protein.
 
     0.606
AS9A_4414
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
     0.533
AS9A_2870
ABC-2 type transporter.
 
    0.495
AS9A_3337
Hypothetical protein.
 
  
 0.483
AS9A_2122
Hypothetical protein.
 
  
 0.477
AS9A_1803
Hypothetical membrane protein.
 
     0.463
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.431
AS9A_0148
O-antigen export system.
  
    0.419
AS9A_0299
Integral membrane protein.
  
  
 0.419
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.